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Slin_1060 protein (Spirosoma linguale) - STRING interaction network
"Slin_1060" - Glucuronate isomerase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1060Glucuronate isomerase (470 aa)    
Predicted Functional Partners:
Slin_1056
Mannitol dehydrogenase domain-containing protein (513 aa)
 
 
  0.989
Slin_1247
Mannitol dehydrogenase domain-containing protein (525 aa)
 
 
  0.986
Slin_1059
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (399 aa)
 
   
  0.969
Slin_2419
Beta-galactosidase (686 aa)
 
   
    0.950
Slin_3895
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (370 aa)
 
   
  0.924
Slin_6196
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (393 aa)
 
   
  0.921
Slin_4183
GHMP kinase (347 aa)
         
    0.900
Slin_1061
Alpha/beta hydrolase fold protein (283 aa)
              0.845
Slin_1423
Xylan 1,4-beta-xylosidase (558 aa)
       
  0.825
Slin_1237
alpha-L-arabinofuranosidase (513 aa)
   
   
    0.824
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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