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Slin_1081 protein (Spirosoma linguale) - STRING interaction network
"Slin_1081" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1081Hypothetical protein (145 aa)    
Predicted Functional Partners:
Slin_1082
Chaperonin Cpn10 (124 aa)
              0.644
Slin_1580
Pyridoxamine 5’-phosphate oxidase-like FMN-binding protein (212 aa)
   
          0.530
Slin_2424
Beta-lactamase (322 aa)
   
          0.515
Slin_1066
Radical SAM domain-containing protein (387 aa)
   
          0.487
Slin_2339
Radical SAM domain-containing protein (350 aa)
   
          0.478
Slin_4151
Hypothetical protein (182 aa)
   
          0.470
Slin_1083
Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane (70 aa)
              0.428
Slin_4563
Hypothetical protein (233 aa)
   
          0.423
Slin_3487
Oxidoreductase domain-containing protein (458 aa)
   
          0.413
Slin_1131
NAD-dependent epimerase/dehydratase (315 aa)
   
          0.407
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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