STRINGSTRING
Slin_1082 protein (Spirosoma linguale) - STRING interaction network
"Slin_1082" - Chaperonin Cpn10 in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1082Chaperonin Cpn10 (124 aa)    
Predicted Functional Partners:
Slin_1081
Hypothetical protein (145 aa)
              0.644
Slin_1083
Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane (70 aa)
              0.550
Slin_2886
Hypothetical protein (326 aa)
   
          0.530
Slin_1179
Lipoprotein (297 aa)
   
          0.465
Slin_6417
Hypothetical protein (501 aa)
   
          0.457
Slin_3301
Hypothetical protein (586 aa)
   
          0.447
lgt
Prolipoprotein diacylglyceryl transferase; Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (281 aa)
              0.427
Slin_4320
Glycoside hydrolase family protein (330 aa)
   
          0.426
Slin_5160
Hypothetical protein (692 aa)
   
          0.425
Slin_4922
Hypothetical protein (513 aa)
   
          0.415
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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