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Slin_1086 protein (Spirosoma linguale) - STRING interaction network
"Slin_1086" - Peptidase M1 membrane alanine aminopeptidase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1086Peptidase M1 membrane alanine aminopeptidase (552 aa)    
Predicted Functional Partners:
Slin_1085
Peptidase S9B dipeptidylpeptidase IV domain-containing protein (718 aa)
 
   
  0.756
Slin_5492
Proteinase inhibitor I4 serpin (412 aa)
       
    0.682
Slin_0301
Hypothetical protein (448 aa)
   
          0.624
Slin_6133
Peptidase M28 (461 aa)
 
 
  0.552
Slin_5214
Peptidase M28 (531 aa)
   
 
  0.533
Slin_1556
Major facilitator superfamily protein (432 aa)
 
  0.531
Slin_6090
Hypothetical protein (398 aa)
   
      0.531
Slin_4942
Aminopeptidase (689 aa)
   
          0.528
fbp
Inositol phosphatase/fructose-16-bisphosphatase (333 aa)
 
        0.521
Slin_4879
Hypothetical protein (170 aa)
   
          0.512
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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