STRINGSTRING
Slin_1087 protein (Spirosoma linguale) - STRING interaction network
"Slin_1087" - Peptidase S8/S53 subtilisin kexin sedolisin in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1087Peptidase S8/S53 subtilisin kexin sedolisin (466 aa)    
Predicted Functional Partners:
Slin_4538
Hypothetical protein (225 aa)
   
  0.736
Slin_1833
Hypothetical protein (476 aa)
   
  0.736
Slin_0458
Ankyrin (161 aa)
     
    0.717
Slin_2707
Hypothetical protein (478 aa)
   
          0.653
Slin_1088
PfkB domain-containing protein (315 aa)
   
   
  0.578
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate (337 aa)
       
      0.557
Slin_4120
ATPase AAA (466 aa)
 
 
  0.526
Slin_2087
DNA/RNA non-specific endonuclease (724 aa)
   
   
  0.460
Slin_1089
Major facilitator superfamily protein (509 aa)
   
   
  0.456
Slin_5139
Glutamate--ammonia ligase (457 aa)
     
 
  0.455
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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