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Slin_1099 protein (Spirosoma linguale) - STRING interaction network
"Slin_1099" - ATP/cobalamin adenosyltransferase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1099ATP/cobalamin adenosyltransferase (192 aa)    
Predicted Functional Partners:
Slin_4600
Hypothetical protein (134 aa)
   
  0.953
Slin_6640
methylmalonyl-CoA mutase large subunit (724 aa)
 
     
  0.764
Slin_2256
methylmalonyl-CoA mutase (1110 aa)
   
   
  0.730
Slin_1098
Branched-chain amino acid aminotransferase (356 aa)
              0.613
Slin_1101
Queuosine biosynthesis protein; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) (409 aa)
              0.580
Slin_1100
Hypothetical protein (169 aa)
              0.574
Slin_1173
LAO/AO transporter ATPase (329 aa)
 
   
  0.490
Slin_2606
Hypothetical protein (132 aa)
 
   
  0.469
Slin_5523
Delta-1-pyrroline-5-carboxylate dehydrogenase (543 aa)
   
   
  0.466
Slin_4408
Aldehyde dehydrogenase (457 aa)
   
   
  0.466
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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