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Slin_1124 protein (Spirosoma linguale) - STRING interaction network
"Slin_1124" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1124Hypothetical protein (831 aa)    
Predicted Functional Partners:
Slin_1125
NADH dehydrogenase (quinone) (623 aa)
 
        0.973
Slin_5026
Sulfate transporter (542 aa)
 
          0.676
Slin_4506
Hypothetical protein (436 aa)
   
          0.583
Slin_4312
LysR family transcriptional regulator (307 aa)
 
          0.565
Slin_4505
TonB-dependent receptor plug (1046 aa)
   
          0.536
Slin_3122
Hypothetical protein (437 aa)
   
          0.490
Slin_6515
Rhodopsin (268 aa)
   
          0.486
Slin_1643
Rhodopsin (250 aa)
   
          0.481
Slin_1126
Hypothetical protein (114 aa)
              0.478
Slin_5944
Proton-translocating NADH-quinone oxidoreductase subunit L (642 aa)
   
        0.457
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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