STRINGSTRING
Slin_1129 protein (Spirosoma linguale) - STRING interaction network
"Slin_1129" - Response regulator receiver protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1129Response regulator receiver protein (143 aa)    
Predicted Functional Partners:
Slin_1036
Multi-sensor signal transduction histidine kinase (527 aa)
   
          0.637
Slin_2170
Response regulator receiver protein (148 aa)
   
          0.591
Slin_5266
Response regulator receiver protein (175 aa)
   
          0.553
Slin_4322
PAS/PAC sensor signal transduction histidine kinase (969 aa)
   
          0.534
Slin_4374
Response regulator receiver protein (155 aa)
   
          0.532
Slin_6598
PAS/PAC sensor signal transduction histidine kinase (809 aa)
   
          0.486
Slin_1881
PAS/PAC sensor signal transduction histidine kinase (435 aa)
   
          0.477
Slin_2254
PAS/PAC sensor signal transduction histidine kinase (829 aa)
   
          0.466
Slin_2064
Histidine kinase (602 aa)
   
          0.462
Slin_1128
AraC family transcriptional regulator (344 aa)
              0.462
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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