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Slin_1161 protein (Spirosoma linguale) - STRING interaction network
"Slin_1161" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1161Hypothetical protein (831 aa)    
Predicted Functional Partners:
Slin_2040
Sporulation domain-containing protein (380 aa)
   
          0.691
Slin_2478
Hypothetical protein (473 aa)
   
          0.625
Slin_3022
Hypothetical protein (174 aa)
 
          0.607
Slin_3588
FAD dependent oxidoreductase (354 aa)
   
        0.587
Slin_5948
Hypothetical protein (204 aa)
   
          0.569
Slin_0490
Hypothetical protein (691 aa)
   
          0.561
Slin_5403
Hypothetical protein (519 aa)
   
          0.549
Slin_5393
Hypothetical protein (1303 aa)
   
          0.541
Slin_1382
Smr protein/MutS2 (340 aa)
   
          0.541
Slin_6617
Oxidoreductase (341 aa)
 
        0.518
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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