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Slin_1176 protein (Spirosoma linguale) - STRING interaction network
"Slin_1176" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1176Hypothetical protein (120 aa)    
Predicted Functional Partners:
Slin_1953
Integrase family protein (405 aa)
   
          0.725
Slin_2926
Heavy metal transport/detoxification protein (71 aa)
   
          0.713
Slin_1825
Hypothetical protein (411 aa)
   
          0.634
Slin_0221
Hypothetical protein (484 aa)
   
          0.597
Slin_3257
Hypothetical protein (185 aa)
   
          0.571
Slin_1746
Hypothetical protein (191 aa)
   
          0.570
queA
S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) (347 aa)
              0.568
Slin_5852
Hypothetical protein (623 aa)
   
          0.563
Slin_5074
Hypothetical protein (67 aa)
   
          0.563
Slin_5872
Integrase family protein (433 aa)
   
          0.558
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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