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Slin_1179 protein (Spirosoma linguale) - STRING interaction network
"Slin_1179" - Lipoprotein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1179Lipoprotein (297 aa)    
Predicted Functional Partners:
Slin_1180
Sodium/hydrogen exchanger (393 aa)
              0.655
Slin_1177
Hypothetical protein (214 aa)
 
          0.519
Slin_3039
Hypothetical protein (534 aa)
   
          0.502
Slin_1178
PAS/PAC sensor signal transduction histidine kinase (1172 aa)
              0.494
Slin_1082
Chaperonin Cpn10 (124 aa)
   
          0.465
Slin_5235
Hypothetical protein (425 aa)
   
          0.444
Slin_0012
Acetyltransferase (195 aa)
   
          0.437
Slin_0499
Hypothetical protein (445 aa)
   
          0.431
Slin_4672
PKD domain-containing protein (941 aa)
   
          0.426
Slin_4180
Hypothetical protein (990 aa)
   
          0.426
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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