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Slin_1182 protein (Spirosoma linguale) - STRING interaction network
"Slin_1182" - Citrate transporter in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1182Citrate transporter (431 aa)    
Predicted Functional Partners:
Slin_1181
Hypothetical protein (115 aa)
              0.646
Slin_1183
Hypothetical protein (236 aa)
              0.623
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (510 aa)
              0.515
Slin_3050
ArsR family transcriptional regulator (106 aa)
   
   
  0.489
Slin_2300
ArsR family transcriptional regulator (99 aa)
   
   
  0.489
Slin_5030
Protein tyrosine phosphatase (172 aa)
   
   
  0.454
Slin_3939
Protein-tyrosine phosphatase, low molecular weight (141 aa)
   
   
  0.454
Slin_0477
NADPH-dependent FMN reductase (181 aa)
   
   
  0.416
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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