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Slin_1183 protein (Spirosoma linguale) - STRING interaction network
"Slin_1183" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1183Hypothetical protein (236 aa)    
Predicted Functional Partners:
Slin_2367
Peptidase M14, carboxypeptidase A (580 aa)
   
          0.687
Slin_3442
Hypothetical protein (248 aa)
   
          0.645
Slin_1182
Citrate transporter (431 aa)
              0.623
Slin_0340
Hypothetical protein (367 aa)
   
          0.610
Slin_1064
Hypothetical protein (151 aa)
   
          0.601
Slin_3465
Hypothetical protein (350 aa)
   
          0.568
Slin_6174
Crp/Fnr family transcriptional regulator (212 aa)
   
          0.552
Slin_0129
Hypothetical protein (211 aa)
   
          0.535
Slin_5171
Hypothetical protein (265 aa)
   
          0.519
Slin_4879
Hypothetical protein (170 aa)
   
          0.519
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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