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Slin_1202 protein (Spirosoma linguale) - STRING interaction network
"Slin_1202" - Class IV aminotransferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1202Class IV aminotransferase (277 aa)    
Predicted Functional Partners:
Slin_3444
Para-aminobenzoate synthase subunit I (435 aa)
 
  0.974
Slin_2317
Dihydropteroate synthase (286 aa)
   
 
  0.945
Slin_4514
Aspartate kinase (818 aa)
   
 
  0.771
Slin_5563
Class IV aminotransferase (283 aa)
   
          0.747
ilvD
Dihydroxy-acid dehydratase (569 aa)
   
 
  0.739
Slin_1829
Dihydroxy-acid dehydratase (568 aa)
   
 
  0.739
hisI
phosphoribosyl-ATP diphosphatase (202 aa)
   
   
  0.716
Slin_5912
Ketol-acid reductoisomerase (347 aa)
   
 
  0.673
Slin_1203
Outer membrane efflux protein (497 aa)
              0.650
Slin_6370
Thiamine pyrophosphate domain-containing TPP-binding protein (599 aa)
   
 
  0.624
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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