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Slin_1222 protein (Spirosoma linguale) - STRING interaction network
"Slin_1222" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1222Hypothetical protein (589 aa)    
Predicted Functional Partners:
Slin_6431
Glycoside hydrolase family protein (325 aa)
   
          0.666
Slin_1722
Hypothetical protein (381 aa)
   
          0.666
Slin_1249
alpha-L-rhamnosidase (951 aa)
   
          0.617
Slin_6613
Hypothetical protein (433 aa)
   
          0.595
Slin_3580
alpha-L-rhamnosidase (918 aa)
   
          0.593
Slin_5097
Hypothetical protein (727 aa)
   
          0.566
Slin_3972
Hypothetical protein (595 aa)
   
          0.552
Slin_1221
RagB/SusD domain-containing protein (539 aa)
              0.543
Slin_3443
Hypothetical protein (952 aa)
   
          0.540
Slin_3442
Hypothetical protein (248 aa)
   
          0.530
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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