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Slin_1226 protein (Spirosoma linguale) - STRING interaction network
"Slin_1226" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1226Hypothetical protein (371 aa)    
Predicted Functional Partners:
Slin_1225
Hypothetical protein (801 aa)
 
          0.959
Slin_1227
TonB-dependent receptor plug (923 aa)
 
          0.907
Slin_1885
Hypothetical protein (440 aa)
   
          0.746
Slin_0566
Hypothetical protein (1086 aa)
   
          0.745
Slin_1228
Hypothetical protein (253 aa)
              0.702
Slin_5493
Hypothetical protein (432 aa)
   
          0.698
Slin_2797
Hypothetical protein (1343 aa)
   
          0.681
Slin_3259
Crp/Fnr family transcriptional regulator (194 aa)
   
          0.650
Slin_5403
Hypothetical protein (519 aa)
   
          0.637
Slin_3977
G-D-S-L family lipolytic protein (593 aa)
   
          0.628
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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