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Slin_1230 protein (Spirosoma linguale) - STRING interaction network
"Slin_1230" - Histidine kinase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1230Histidine kinase (432 aa)    
Predicted Functional Partners:
Slin_4198
PAS/PAC sensor hybrid histidine kinase (1185 aa)
   
          0.734
Slin_2656
Histidine kinase (246 aa)
   
          0.734
Slin_5440
GAF sensor signal transduction histidine kinase (407 aa)
   
          0.723
Slin_0190
Histidine kinase (472 aa)
   
          0.710
Slin_0595
PAS/PAC sensor signal transduction histidine kinase (752 aa)
   
          0.708
Slin_3829
PAS/PAC sensor signal transduction histidine kinase (475 aa)
   
          0.700
Slin_3312
Multi-sensor hybrid histidine kinase (1226 aa)
   
          0.697
Slin_1893
PAS/PAC sensor signal transduction histidine kinase (644 aa)
   
          0.696
Slin_1270
PAS/PAC sensor signal transduction histidine kinase (405 aa)
   
          0.692
Slin_2761
PAS/PAC sensor signal transduction histidine kinase (679 aa)
   
          0.690
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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