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Slin_1232 protein (Spirosoma linguale) - STRING interaction network
"Slin_1232" - Endoribonuclease L-PSP in Spirosoma linguale
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1232Endoribonuclease L-PSP (158 aa)    
Predicted Functional Partners:
Slin_1233
Alanine racemase domain-containing protein (371 aa)
 
        0.968
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (702 aa)
     
    0.947
Slin_3958
Peptidase M19 renal dipeptidase (362 aa)
 
        0.715
Slin_1231
Lysophospholipase L1-like protein (280 aa)
              0.582
Slin_3386
Gluconate transporter (438 aa)
 
          0.529
Slin_2470
Gluconate transporter (438 aa)
 
          0.523
Slin_2508
PAS/PAC sensor hybrid histidine kinase (784 aa)
       
 
  0.480
Slin_5304
Glycerophosphoryl diester phosphodiesterase (422 aa)
 
          0.465
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (894 aa)
              0.461
Slin_6177
Beta-lactamase (470 aa)
   
        0.457
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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