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Slin_1236 protein (Spirosoma linguale) - STRING interaction network
"Slin_1236" - Class II aldolase/adducin family protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1236Class II aldolase/adducin family protein (233 aa)    
Predicted Functional Partners:
araB
L-ribulokinase (544 aa)
 
 
  0.988
Slin_4247
Carbohydrate kinase (492 aa)
 
   
  0.952
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose (496 aa)
 
   
  0.932
Slin_2540
Ribulose-phosphate 3-epimerase (223 aa)
       
  0.904
Slin_1237
alpha-L-arabinofuranosidase (513 aa)
 
     
  0.836
Slin_1235
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer (387 aa)
   
   
  0.705
Slin_4382
L-fucose isomerase-like protein; Catalyzes the conversion of L-arabinose to L-ribulose (498 aa)
 
   
  0.586
Slin_6275
Hypothetical protein (281 aa)
 
          0.586
Slin_5488
Xylose isomerase (285 aa)
   
          0.548
Slin_6560
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose (499 aa)
   
   
  0.476
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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