STRINGSTRING
Slin_1258 protein (Spirosoma linguale) - STRING interaction network
"Slin_1258" - Glycoside hydrolase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1258Glycoside hydrolase (779 aa)    
Predicted Functional Partners:
Slin_5052
Glycoside hydrolase family protein (587 aa)
         
  0.910
Slin_5726
Glycoside hydrolase (656 aa)
         
  0.900
Slin_1895
Beta-galactosidase (454 aa)
 
   
  0.861
Slin_2687
Glycoside hydrolase (677 aa)
   
   
 
0.836
Slin_1257
Glycoside hydrolase family protein (1347 aa)
              0.771
Slin_5802
Inosine/uridine-preferring nucleoside hydrolase (341 aa)
 
          0.724
Slin_3580
alpha-L-rhamnosidase (918 aa)
 
          0.546
Slin_1256
Esterase (375 aa)
              0.523
Slin_4196
Glycoside hydrolase (1002 aa)
 
     
  0.508
Slin_1249
alpha-L-rhamnosidase (951 aa)
 
          0.504
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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