STRINGSTRING
Slin_1276 protein (Spirosoma linguale) - STRING interaction network
"Slin_1276" - Antibiotic biosynthesis monooxygenase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1276Antibiotic biosynthesis monooxygenase (148 aa)    
Predicted Functional Partners:
Slin_1275
RagB/SusD domain-containing protein (460 aa)
              0.563
Slin_1274
TonB-dependent receptor plug (1066 aa)
              0.558
Slin_1069
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (375 aa)
   
          0.474
Slin_2603
Response regulator receiver protein (141 aa)
   
          0.441
Slin_4050
Type III restriction protein res subunit (453 aa)
 
          0.427
Slin_4232
Hypothetical protein (341 aa)
   
          0.411
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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