STRINGSTRING
Slin_1294 protein (Spirosoma linguale) - STRING interaction network
"Slin_1294" - Fatty acid hydroxylase in Spirosoma linguale
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1294Fatty acid hydroxylase (298 aa)    
Predicted Functional Partners:
Slin_0540
Fatty acid hydroxylase (288 aa)
   
          0.763
Slin_5959
Squalene/phytoene synthase (278 aa)
   
 
  0.565
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho’s RNA-dependent ATPase activity, and release of the mRNA from the DNA template (750 aa)
              0.546
Slin_2149
Monooxygenase FAD-binding protein (391 aa)
     
 
  0.518
Slin_2116
Monooxygenase FAD-binding protein (384 aa)
     
 
  0.518
Slin_1542
Monooxygenase FAD-binding protein (374 aa)
     
 
  0.518
Slin_1534
4-hydroxybenzoate 3-monooxygenase (405 aa)
     
 
  0.518
Slin_0336
Monooxygenase FAD-binding protein (412 aa)
     
 
  0.518
Slin_4880
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (379 aa)
     
      0.463
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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