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Slin_1304 protein (Spirosoma linguale) - STRING interaction network
"Slin_1304" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1304Hypothetical protein (301 aa)    
Predicted Functional Partners:
Slin_1305
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (412 aa)
              0.850
Slin_1306
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (103 aa)
 
          0.835
Slin_1303
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA (557 aa)
 
          0.787
Slin_5203
OmpA/MotB domain-containing protein (668 aa)
 
          0.783
Slin_1311
OmpA/MotB domain-containing protein (757 aa)
 
          0.778
Slin_6621
Hypothetical protein (2541 aa)
   
          0.778
Slin_5950
Hypothetical protein (400 aa)
   
          0.778
Slin_4282
Hypothetical protein (432 aa)
   
          0.778
Slin_3226
Hypothetical protein (324 aa)
   
          0.778
Slin_3219
Hypothetical protein (749 aa)
   
          0.778
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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