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Slin_1332 protein (Spirosoma linguale) - STRING interaction network
"Slin_1332" - Peptidase U62 modulator of DNA gyrase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1332Peptidase U62 modulator of DNA gyrase (546 aa)    
Predicted Functional Partners:
Slin_1334
Peptidase U62 modulator of DNA gyrase (449 aa)
 
          0.932
Slin_1331
Peptidase U62 modulator of DNA gyrase (445 aa)
 
          0.931
Slin_1325
Hypothetical protein (205 aa)
 
          0.827
Slin_1321
Hypothetical protein (736 aa)
 
          0.812
Slin_1333
Hypothetical protein (128 aa)
              0.671
Slin_1323
Hypothetical protein (283 aa)
 
          0.655
Slin_4988
Colicin V production protein (181 aa)
   
          0.480
Slin_1330
Hypothetical protein (89 aa)
              0.477
Slin_1329
Hypothetical protein (79 aa)
              0.475
Slin_0640
NAD+ synthetase (700 aa)
   
   
  0.450
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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