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Slin_1333 protein (Spirosoma linguale) - STRING interaction network
"Slin_1333" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1333Hypothetical protein (128 aa)    
Predicted Functional Partners:
Slin_1334
Peptidase U62 modulator of DNA gyrase (449 aa)
              0.734
Slin_1332
Peptidase U62 modulator of DNA gyrase (546 aa)
              0.671
Slin_5254
Peptidase S41 (503 aa)
   
          0.589
Slin_6149
Peptidase S41 (513 aa)
   
          0.536
Slin_1335
Peptidase U62 modulator of DNA gyrase (552 aa)
              0.516
Slin_4688
Restriction endonuclease (319 aa)
   
          0.497
Slin_0897
Radical SAM protein (454 aa)
   
          0.483
Slin_1331
Peptidase U62 modulator of DNA gyrase (445 aa)
              0.458
Slin_2270
Hypothetical protein (464 aa)
   
          0.441
Slin_4875
S23 ribosomal protein (119 aa)
   
          0.434
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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