STRINGSTRING
Slin_1340 protein (Spirosoma linguale) - STRING interaction network
"Slin_1340" - Esterase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1340Esterase (234 aa)    
Predicted Functional Partners:
Slin_1338
Hypothetical protein (352 aa)
 
          0.882
Slin_1341
Esterase (279 aa)
 
          0.866
Slin_4527
Esterase (358 aa)
 
          0.852
Slin_4524
Biotin carboxylase (403 aa)
 
          0.845
Slin_1316
Glutamate--cysteine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity (366 aa)
 
          0.591
Slin_1339
Hypothetical protein (70 aa)
              0.580
Slin_1342
Glycoside hydrolase family protein (274 aa)
              0.534
Slin_2144
Esterase (400 aa)
 
          0.481
Slin_2109
Esterase (421 aa)
 
          0.479
Slin_2345
Oxidoreductase molybdopterin binding protein (170 aa)
   
          0.472
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (15%) [HD]