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Slin_1353 protein (Spirosoma linguale) - STRING interaction network
"Slin_1353" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1353Hypothetical protein (219 aa)    
Predicted Functional Partners:
Slin_4278
Hypothetical protein (303 aa)
 
          0.795
Slin_0793
Hypothetical protein (420 aa)
 
          0.778
Slin_5521
Hypothetical protein (607 aa)
   
          0.778
Slin_5518
Chromosome segregation ATPase (1100 aa)
   
          0.778
Slin_1374
Hypothetical protein (705 aa)
   
          0.778
Slin_1217
Hypothetical protein (700 aa)
   
          0.778
Slin_0577
Hypothetical protein (422 aa)
   
          0.778
Slin_1352
Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (239 aa)
              0.756
Slin_4551
Antibiotic biosynthesis monooxygenase (99 aa)
   
          0.728
Slin_0365
MarR family transcriptional regulator (151 aa)
   
          0.684
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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