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Slin_1355 protein (Spirosoma linguale) - STRING interaction network
"Slin_1355" - 5' nucleotidase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_13555’ nucleotidase (175 aa)    
Predicted Functional Partners:
Slin_3943
Purine nucleoside phosphorylase I; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate (271 aa)
         
    0.900
Slin_1193
Inosine-5’-monophosphate dehydrogenase (490 aa)
         
    0.900
Slin_1356
Hypothetical protein (500 aa)
              0.540
Slin_1312
Hypothetical protein (169 aa)
   
          0.540
Slin_5051
Hypothetical protein (115 aa)
   
          0.468
Slin_0518
Glutamate carboxypeptidase II (734 aa)
   
          0.400
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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