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Slin_1358 protein (Spirosoma linguale) - STRING interaction network
"Slin_1358" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1358Hypothetical protein (256 aa)    
Predicted Functional Partners:
Slin_1357
Competence/damage-inducible protein CinA (417 aa)
              0.596
Slin_6429
Response regulator receiver protein (553 aa)
   
          0.532
Slin_3022
Hypothetical protein (174 aa)
   
          0.529
Slin_0760
Hypothetical protein (151 aa)
   
          0.525
Slin_3376
Hypothetical protein (80 aa)
   
          0.516
Slin_0283
Hypothetical protein (221 aa)
   
          0.502
Slin_6235
Hypothetical protein (151 aa)
   
          0.471
Slin_5341
Hypothetical protein (300 aa)
   
          0.468
Slin_1928
Hypothetical protein (206 aa)
   
          0.443
Slin_4190
Hypothetical protein (395 aa)
   
          0.432
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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