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Slin_1398 protein (Spirosoma linguale) - STRING interaction network
"Slin_1398" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1398Hypothetical protein (799 aa)    
Predicted Functional Partners:
Slin_3219
Hypothetical protein (749 aa)
   
          0.772
Slin_6621
Hypothetical protein (2541 aa)
   
          0.770
Slin_0659
Hypothetical protein (335 aa)
   
          0.763
Slin_4282
Hypothetical protein (432 aa)
   
          0.762
Slin_3226
Hypothetical protein (324 aa)
   
          0.758
Slin_4495
Hypothetical protein (489 aa)
   
          0.756
Slin_6454
Hypothetical protein (231 aa)
   
          0.755
Slin_5950
Hypothetical protein (400 aa)
   
          0.752
Slin_5393
Hypothetical protein (1303 aa)
   
          0.750
Slin_4333
FG-GAP repeat-containing protein (758 aa)
   
          0.746
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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