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Slin_1436 protein (Spirosoma linguale) - STRING interaction network
"Slin_1436" - TetR family transcriptional regulator in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1436TetR family transcriptional regulator (206 aa)    
Predicted Functional Partners:
Slin_3994
TetR family transcriptional regulator (238 aa)
   
          0.554
Slin_3456
Peptidase S8/S53 subtilisin kexin sedolisin (515 aa)
   
          0.550
Slin_1435
Pyridine nucleotide-disulfide oxidoreductase dimerisation subunit (452 aa)
              0.516
Slin_5505
RND family efflux transporter MFP subunit (375 aa)
 
          0.457
Slin_1650
Peptidase S8/S53 subtilisin kexin sedolisin (557 aa)
   
          0.450
Slin_3951
RagB/SusD domain-containing protein (491 aa)
   
          0.428
Slin_5334
Excisionase family DNA binding domain-containing protein (124 aa)
   
          0.416
Slin_1275
RagB/SusD domain-containing protein (460 aa)
   
          0.415
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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