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Slin_1447 protein (Spirosoma linguale) - STRING interaction network
"Slin_1447" - Cytochrome C assembly protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1447Cytochrome C assembly protein (221 aa)    
Predicted Functional Partners:
Slin_1448
Cytochrome C biogenesis protein CcmB (224 aa)
 
   
    0.986
Slin_1442
Cytochrome C assembly protein (888 aa)
 
   
  0.949
Slin_1445
Hypothetical protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (159 aa)
 
          0.934
Slin_1446
Hypothetical protein (84 aa)
              0.749
Slin_1444
Hypothetical protein (65 aa)
              0.607
Slin_1443
Hypothetical protein (88 aa)
              0.607
Slin_1441
Hypothetical protein (75 aa)
              0.607
Slin_6496
ABC transporter (208 aa)
 
     
  0.588
Slin_0714
Hypothetical protein (109 aa)
   
          0.582
Slin_5169
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (1029 aa)
   
   
  0.550
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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