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Slin_1448 protein (Spirosoma linguale) - STRING interaction network
"Slin_1448" - Cytochrome C biogenesis protein CcmB in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1448Cytochrome C biogenesis protein CcmB (224 aa)    
Predicted Functional Partners:
Slin_1447
Cytochrome C assembly protein (221 aa)
 
   
    0.986
Slin_1445
Hypothetical protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (159 aa)
 
          0.915
Slin_1442
Cytochrome C assembly protein (888 aa)
 
          0.895
Slin_3840
Cytochrome C assembly protein (240 aa)
 
          0.842
Slin_0714
Hypothetical protein (109 aa)
   
          0.776
Slin_5981
Hypothetical protein (298 aa)
   
          0.771
Slin_3587
Hypothetical protein (1087 aa)
   
          0.763
Slin_0526
Hypothetical protein (354 aa)
   
          0.756
Slin_0230
Hypothetical protein (969 aa)
   
          0.753
Slin_0229
Hypothetical protein (963 aa)
   
          0.753
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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