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Slin_1457 protein (Spirosoma linguale) - STRING interaction network
"Slin_1457" - Rhodanese in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1457Rhodanese (102 aa)    
Predicted Functional Partners:
Slin_1458
Hypothetical protein (124 aa)
              0.703
Slin_2569
Hypothetical protein (373 aa)
   
          0.682
Slin_2430
Peptidase M28 (394 aa)
   
          0.661
Slin_4644
Hypothetical protein (350 aa)
   
          0.542
Slin_5605
Hypothetical protein (361 aa)
   
          0.514
Slin_2733
Hypothetical protein (570 aa)
   
          0.508
Slin_1459
ATP-binding protein; Molecular chaperone. Has ATPase activity (610 aa)
              0.502
Slin_2543
Hypothetical protein (607 aa)
   
          0.484
Slin_2001
Hypothetical protein (500 aa)
   
          0.480
Slin_5097
Hypothetical protein (727 aa)
   
          0.464
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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