STRINGSTRING
Slin_1477 protein (Spirosoma linguale) - STRING interaction network
"Slin_1477" - FAD dependent oxidoreductase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1477FAD dependent oxidoreductase (420 aa)    
Predicted Functional Partners:
Slin_1479
Dihydrodipicolinate synthetase (304 aa)
 
   
  0.970
Slin_1478
4-hydroxyproline epimerase; Catalyzes the epimerization of trans-4-hydroxy-L-proline (t4LHyp) to cis-4-hydroxy-D-proline (c4DHyp). Is likely involved in a degradation pathway that converts t4LHyp to alpha- ketoglutarate. Displays no proline racemase activity (334 aa)
 
          0.969
Slin_4403
Class I and II aminotransferase (405 aa)
   
 
  0.909
Slin_6129
Class I and II aminotransferase (390 aa)
     
 
    0.901
Slin_3478
Class I and II aminotransferase (379 aa)
     
 
    0.901
hisC
Histidinol-phosphate aminotransferase (374 aa)
     
 
    0.901
Slin_6320
4-hydroxyphenylpyruvate dioxygenase (377 aa)
     
 
    0.901
Slin_2266
Alanine racemase (835 aa)
   
   
  0.775
Slin_5941
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (526 aa)
   
 
  0.693
Slin_1480
AraC family transcriptional regulator (288 aa)
 
          0.678
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (8%) [HD]