STRINGSTRING
Slin_1479 protein (Spirosoma linguale) - STRING interaction network
"Slin_1479" - Dihydrodipicolinate synthetase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1479Dihydrodipicolinate synthetase (304 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (244 aa)
 
 
  0.988
Slin_4514
Aspartate kinase (818 aa)
 
 
  0.982
Slin_1478
4-hydroxyproline epimerase; Catalyzes the epimerization of trans-4-hydroxy-L-proline (t4LHyp) to cis-4-hydroxy-D-proline (c4DHyp). Is likely involved in a degradation pathway that converts t4LHyp to alpha- ketoglutarate. Displays no proline racemase activity (334 aa)
 
        0.973
Slin_1477
FAD dependent oxidoreductase (420 aa)
 
   
  0.970
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate (337 aa)
   
 
  0.968
Slin_6589
Dihydrodipicolinate synthetase (308 aa)
   
   
    0.894
Slin_0609
Dihydrodipicolinate synthetase (317 aa)
   
   
 
0.848
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (298 aa)
   
   
 
0.847
Slin_1008
Aldehyde dehydrogenase (536 aa)
 
        0.818
Slin_1999
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (271 aa)
 
   
  0.791
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (7%) [HD]