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Slin_1485 protein (Spirosoma linguale) - STRING interaction network
"Slin_1485" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1485Hypothetical protein (289 aa)    
Predicted Functional Partners:
Slin_0369
Hypothetical protein (446 aa)
   
          0.722
Slin_3793
Hypothetical protein (428 aa)
   
          0.718
Slin_6629
Hypothetical protein (458 aa)
   
          0.717
Slin_3025
Hypothetical protein (239 aa)
   
          0.692
Slin_5122
Hypothetical protein (1005 aa)
   
          0.593
Slin_1486
G-D-S-L family lipolytic protein (264 aa)
              0.566
Slin_2220
Hypothetical protein (430 aa)
   
          0.559
Slin_1475
Hypothetical protein (467 aa)
   
          0.537
Slin_4841
Excinuclease ABC subunit C (511 aa)
   
          0.536
Slin_5981
Hypothetical protein (298 aa)
   
          0.529
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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