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Slin_1486 protein (Spirosoma linguale) - STRING interaction network
"Slin_1486" - G-D-S-L family lipolytic protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1486G-D-S-L family lipolytic protein (264 aa)    
Predicted Functional Partners:
Slin_2404
Hypothetical protein (287 aa)
 
          0.573
Slin_1485
Hypothetical protein (289 aa)
              0.566
Slin_4320
Glycoside hydrolase family protein (330 aa)
   
          0.540
Slin_2368
Beta-lactamase (530 aa)
 
          0.521
Slin_2414
Hypothetical protein (377 aa)
 
          0.498
Slin_3972
Hypothetical protein (595 aa)
   
          0.495
Slin_4720
Hypothetical protein (655 aa)
   
          0.483
Slin_2648
ADP-ribosylation/crystallin J1 (543 aa)
   
          0.471
Slin_5461
Membrane bound O-acyl transferase MBOAT family protein (479 aa)
   
        0.460
Slin_3863
Membrane bound O-acyl transferase MBOAT family protein (475 aa)
   
        0.460
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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