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Slin_1500 protein (Spirosoma linguale) - STRING interaction network
"Slin_1500" - PepSY-associated TM helix domain-containing protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1500PepSY-associated TM helix domain-containing protein (212 aa)    
Predicted Functional Partners:
Slin_1501
ApbE family lipoprotein (509 aa)
 
          0.981
Slin_4581
Hypothetical protein (494 aa)
   
          0.706
Slin_5069
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein (336 aa)
 
          0.658
Slin_1874
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein (317 aa)
 
          0.604
Slin_1499
Hypothetical protein (237 aa)
              0.562
Slin_3405
Hypothetical protein (565 aa)
   
          0.471
Slin_1502
Glyoxalase/bleomycin resistance protein/dioxygenase (131 aa)
              0.456
Slin_1503
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen (437 aa)
              0.414
Slin_1573
PepSY-associated TM helix domain-containing protein (351 aa)
   
          0.403
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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