STRINGSTRING
Slin_1526 protein (Spirosoma linguale) - STRING interaction network
"Slin_1526" - CDP-alcohol phosphatidyltransferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1526CDP-alcohol phosphatidyltransferase (428 aa)    
Predicted Functional Partners:
Slin_1524
GtrA family protein (125 aa)
 
          0.954
Slin_1527
PA-phosphatase-like phosphoesterase (311 aa)
 
          0.943
Slin_1523
Phosphatidylglycerophosphatase A (158 aa)
 
          0.931
Slin_1525
Hypothetical protein (855 aa)
 
          0.865
Slin_5887
PfkB domain-containing protein (285 aa)
 
          0.604
Slin_0554
RagB/SusD domain-containing protein (582 aa)
   
          0.599
Slin_4715
Hypothetical protein (394 aa)
   
          0.576
Slin_4648
Biopolymertransporter ExbD/TolR (193 aa)
   
          0.521
Slin_0553
TonB-dependent receptor plug (1036 aa)
   
          0.468
Slin_1257
Glycoside hydrolase family protein (1347 aa)
   
          0.466
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (11%) [HD]