STRINGSTRING
Slin_1527 protein (Spirosoma linguale) - STRING interaction network
"Slin_1527" - PA-phosphatase-like phosphoesterase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1527PA-phosphatase-like phosphoesterase (311 aa)    
Predicted Functional Partners:
Slin_1526
CDP-alcohol phosphatidyltransferase (428 aa)
 
          0.943
Slin_1524
GtrA family protein (125 aa)
 
          0.934
Slin_1523
Phosphatidylglycerophosphatase A (158 aa)
 
          0.916
Slin_1525
Hypothetical protein (855 aa)
 
          0.796
Slin_0554
RagB/SusD domain-containing protein (582 aa)
   
          0.719
Slin_4648
Biopolymertransporter ExbD/TolR (193 aa)
   
          0.659
Slin_0553
TonB-dependent receptor plug (1036 aa)
   
          0.652
Slin_1274
TonB-dependent receptor plug (1066 aa)
   
          0.624
Slin_5362
Hypothetical protein (213 aa)
   
          0.616
Slin_2101
TonB-dependent receptor plug (1038 aa)
   
          0.614
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (9%) [HD]