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Slin_1536 protein (Spirosoma linguale) - STRING interaction network
"Slin_1536" - 3-carboxy-cis,cis-muconate cycloisomerase in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_15363-carboxy-cis,cis-muconate cycloisomerase (438 aa)    
Predicted Functional Partners:
Slin_1537
Protocatechuate 3,4-dioxygenase subunit alpha (173 aa)
 
   
  0.997
Slin_1538
Protocatechuate 3,4-dioxygenase subunit beta (235 aa)
 
 
  0.997
Slin_1535
3-oxoadipate enol-lactonase (373 aa)
 
 
  0.995
Slin_6005
Phosphoribosylformylglycinamidine cyclo-ligase (389 aa)
   
 
  0.942
Slin_1534
4-hydroxybenzoate 3-monooxygenase (405 aa)
 
     
  0.941
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (510 aa)
 
   
  0.934
purD
Phosphoribosylamine/glycine ligase (428 aa)
 
 
  0.929
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase (313 aa)
   
 
  0.893
purH
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (517 aa)
   
 
  0.893
Slin_5971
Amidophosphoribosyltransferase (630 aa)
   
 
  0.883
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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