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Slin_1537 protein (Spirosoma linguale) - STRING interaction network
"Slin_1537" - Protocatechuate 3,4-dioxygenase subunit alpha in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1537Protocatechuate 3,4-dioxygenase subunit alpha (173 aa)    
Predicted Functional Partners:
Slin_1538
Protocatechuate 3,4-dioxygenase subunit beta (235 aa)
 
  0.998
Slin_1536
3-carboxy-cis,cis-muconate cycloisomerase (438 aa)
 
   
  0.997
Slin_1534
4-hydroxybenzoate 3-monooxygenase (405 aa)
 
 
  0.994
Slin_1535
3-oxoadipate enol-lactonase (373 aa)
 
   
  0.962
Slin_1533
3-oxoacid CoA-transferase subunit B (447 aa)
   
   
  0.867
Slin_3903
Intradiol ring-cleavage dioxygenase (327 aa)
   
          0.778
Slin_1539
AraC family transcriptional regulator (293 aa)
 
     
  0.722
Slin_1532
Beta-ketoadipyl CoA thiolase (401 aa)
   
   
  0.507
Slin_1556
Major facilitator superfamily protein (432 aa)
 
   
  0.446
Slin_2526
Rieske (2Fe-2S) domain-containing protein (350 aa)
   
          0.437
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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