STRINGSTRING
Slin_1556 protein (Spirosoma linguale) - STRING interaction network
"Slin_1556" - Major facilitator superfamily protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1556Major facilitator superfamily protein (432 aa)    
Predicted Functional Partners:
Slin_1534
4-hydroxybenzoate 3-monooxygenase (405 aa)
 
  0.816
Slin_3184
Sugar transporter (441 aa)
 
  0.797
Slin_2840
Major facilitator superfamily protein (415 aa)
   
          0.585
Slin_3633
Major facilitator superfamily protein (415 aa)
   
          0.584
Slin_5082
Zn-dependent aminopeptidase (792 aa)
 
  0.536
Slin_1557
Amidohydrolase 2 (289 aa)
   
        0.537
Slin_1559
vitamin-B12 independent methionine synthase (369 aa)
 
        0.536
Slin_5083
Aminopeptidase (801 aa)
 
  0.535
Slin_1086
Peptidase M1 membrane alanine aminopeptidase (552 aa)
 
  0.531
Slin_4383
Major facilitator superfamily protein (420 aa)
   
          0.519
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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