STRINGSTRING
Slin_1583 protein (Spirosoma linguale) - STRING interaction network
"Slin_1583" - ROK family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1583ROK family protein (306 aa)    
Predicted Functional Partners:
Slin_2562
ROK family protein (314 aa)
   
          0.778
Slin_2646
ROK family protein (298 aa)
   
          0.777
Slin_6585
ROK family protein (278 aa)
   
          0.776
Slin_5156
ROK family protein (304 aa)
   
          0.776
Slin_2932
N-acetylglucosamine-6-phosphate deacetylase (389 aa)
 
   
  0.661
Slin_2625
Dihydrodipicolinate synthetase (315 aa)
 
   
  0.584
Slin_6212
N-acetylglucosamine-6-phosphate deacetylase (398 aa)
 
   
  0.561
cutC
CutC family protein; Involved in copper homeostasis (263 aa)
 
          0.520
Slin_6213
Glucosamine/galactosamine-6-phosphate isomerase (255 aa)
   
 
  0.469
Slin_5415
Glucosamine-6-phosphate isomerase (657 aa)
   
 
  0.469
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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