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Slin_1599 protein (Spirosoma linguale) - STRING interaction network
"Slin_1599" - ATP-dependent Clp protease adaptor protein ClpS in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1599ATP-dependent Clp protease adaptor protein ClpS (92 aa)    
Predicted Functional Partners:
Slin_5948
Hypothetical protein (204 aa)
   
          0.777
Slin_5545
Hypothetical protein (165 aa)
   
          0.771
Slin_1344
Hypothetical protein (355 aa)
   
          0.771
Slin_5874
Hypothetical protein (245 aa)
   
          0.756
Slin_1361
Gliding motility-associated protein GldC (118 aa)
   
          0.754
Slin_4984
Phospholipid/glycerol acyltransferase (251 aa)
   
          0.750
Slin_2852
Hypothetical protein (759 aa)
   
          0.736
bshC
Hypothetical protein (515 aa)
   
          0.732
Slin_5517
Hypothetical protein (117 aa)
   
          0.726
Slin_3865
Hypothetical protein (822 aa)
   
          0.715
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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