STRINGSTRING
Slin_1603 protein (Spirosoma linguale) - STRING interaction network
"Slin_1603" - Chromate transporter in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1603Chromate transporter (400 aa)    
Predicted Functional Partners:
Slin_1602
2OG-Fe(II) oxygenase (318 aa)
              0.648
Slin_2797
Hypothetical protein (1343 aa)
   
          0.494
Slin_5981
Hypothetical protein (298 aa)
   
          0.492
Slin_2434
Class V aminotransferase (338 aa)
   
          0.479
Slin_2823
AraC family transcriptional regulator (285 aa)
 
     
  0.469
Slin_3587
Hypothetical protein (1087 aa)
   
          0.456
Slin_1382
Smr protein/MutS2 (340 aa)
   
          0.447
Slin_2018
Hypothetical protein (686 aa)
   
          0.423
Slin_1601
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (231 aa)
              0.412
Slin_6177
Beta-lactamase (470 aa)
              0.405
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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