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Slin_1613 protein (Spirosoma linguale) - STRING interaction network
"Slin_1613" - Lipoprotein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1613Lipoprotein (345 aa)    
Predicted Functional Partners:
Slin_3372
Hypothetical protein (455 aa)
   
          0.601
Slin_2270
Hypothetical protein (464 aa)
   
          0.587
Slin_1614
Sua5/YciO/YrdC/YwlC family protein (206 aa)
              0.586
Slin_4915
Hypothetical protein (150 aa)
   
          0.560
Slin_5456
MazE family transcriptional regulator (85 aa)
   
          0.534
Slin_5033
Hypothetical protein (168 aa)
   
          0.517
Slin_1615
Family 2 glycosyl transferase (331 aa)
              0.436
Slin_4676
Polysaccharide deacetylase (322 aa)
 
          0.429
Slin_4564
Hypothetical protein (171 aa)
   
          0.418
Slin_1225
Hypothetical protein (801 aa)
   
          0.410
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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