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Slin_1615 protein (Spirosoma linguale) - STRING interaction network
"Slin_1615" - Family 2 glycosyl transferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1615Family 2 glycosyl transferase (331 aa)    
Predicted Functional Partners:
Slin_4093
Family 2 glycosyl transferase (296 aa)
          0.800
Slin_6302
Family 2 glycosyl transferase (312 aa)
   
          0.778
Slin_4928
Family 2 glycosyl transferase (234 aa)
   
          0.776
Slin_4364
Family 2 glycosyl transferase (294 aa)
 
     
  0.755
Slin_1614
Sua5/YciO/YrdC/YwlC family protein (206 aa)
              0.623
Slin_5839
UDP-glucose 4-epimerase (343 aa)
 
   
  0.600
Slin_0891
Family 2 glycosyl transferase (257 aa)
   
          0.594
Slin_4365
Group 1 glycosyl transferase (422 aa)
 
 
  0.590
Slin_6090
Hypothetical protein (398 aa)
   
 
  0.571
Slin_2238
Family 2 glycosyl transferase (374 aa)
   
          0.563
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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