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Slin_1616 protein (Spirosoma linguale) - STRING interaction network
"Slin_1616" - Ribonuclease BN in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_1616Ribonuclease BN (318 aa)    
Predicted Functional Partners:
Slin_1618
Aminodeoxychorismate lyase (345 aa)
              0.798
Slin_1617
Thioesterase superfamily protein (136 aa)
              0.798
Slin_4584
Phospholipid/glycerol acyltransferase (246 aa)
 
     
  0.477
priA
Primosomal protein N’; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA (804 aa)
 
          0.473
Slin_4182
UTP-glucose-1-phosphate uridylyltransferase (287 aa)
 
 
      0.471
Slin_5612
Hypothetical protein (383 aa)
 
        0.469
Slin_2596
Nucleotidyl transferase (319 aa)
 
 
      0.457
Slin_5063
D-lactate dehydrogenase (1009 aa)
     
      0.454
Slin_4649
D-lactate dehydrogenase (1034 aa)
     
      0.454
Slin_1615
Family 2 glycosyl transferase (331 aa)
              0.452
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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